Insertion junction: CLIP2.037296_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.037296
Chromosome:chromosome 12
Location:731695
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g492750 (1 of 5) 3.2.1.1 - Alpha-amylase / Glycogenase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGGTCAGCCTCGCGCTTGGCCACGGCCGCCTGCTGCTGACGCGCTGCG
Internal bar code:GTGGTTATTTGAAGCCTTTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1310
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGTTGCCTTCCAATAGGT
Suggested primer 2:AGTGCCTACCTCGTCCATCT