Insertion junction: CLIP2.037301_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.037301
Chromosome:chromosome 11
Location:3749913
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g801328 (1 of 4) PF00385//PF00665 - Chromo (CHRromatin Organisation MOdifier) domain (Chromo) // Integrase core domain (rve) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGTGCAAGCAATCACGCGCGGGCAACGGACCCGCGATGCACCTCCACC
Internal bar code:CTCTAAAAAAACGAGGTGGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3871
LEAP-Seq percent confirming:24.7059
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:64
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTGTGCGCAAGAGCTTGT
Suggested primer 2:CGGACGCATCAATCTACGGA