Insertion junction: CLIP2.037314_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.037314
Chromosome:chromosome 7
Location:2032118
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325700 SRH15 SNF2-related DNA/RNA helicase; (1 of 1) PTHR10799//PTHR10799:SF577 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // PROTEIN TAF-3, ISOFORM A intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTAAACCCTGACACACGCACACACGCCGCCCCGCATCCACCCCGCTTAT
Internal bar code:TACAGGTGTGCCAGTATCACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:857
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TGATGTAGCGCCAGTCGATC
Suggested primer 2:CTTCCGTACATCCTACCGCC