Insertion junction: CLIP2.037325_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.037325
Chromosome:chromosome 4
Location:1606501
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g213150 MAE13 MATE efflux family protein; (1 of 5) PTHR11206//PTHR11206:SF94 - MULTIDRUG RESISTANCE PROTEIN // DNA-DAMAGE-INDUCIBLE PROTEIN F intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTTGCCTCGAGGCGCAGGTCCCCGACTGCACGTGCCCGACGTCAGCGC
Internal bar code:ACTGTGTTGATATCGAAACCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1725
LEAP-Seq percent confirming:93.2331
LEAP-Seq n confirming:124
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:133

Suggested primers for confirmation by PCR

Suggested primer 1:CATCGCTAGGTCAGAGGCTG
Suggested primer 2:CGGTGAGGAACAGCAGGAAT