Insertion junction: CLIP2.037329_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.037329
Chromosome:chromosome 8
Location:1144988
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g362950 (1 of 3) IPR002202 - Hydroxymethylglutaryl-CoA reductase, class I/II intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAAGGCGTGCGGTATGCCTGTTGCATATCGGGACTGGCGCTACATAGC
Internal bar code:AACGCTCACGTTTTCTAGCACC

Confirmation - LEAP-Seq

LEAP-Seq distance:2378
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGCTGCGTGAGTGAATCA
Suggested primer 2:CGTCACACGGGTGGTAAGAA