Insertion junction: CLIP2.037340_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.037340
Chromosome:chromosome 3
Location:1967885
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g155501 (1 of 1) PTHR30269 - TRANSMEMBRANE PROTEIN YFCA CDS
Cre03.g155527 (1 of 1) IPR027363 - Methylthioribose-1-phosphate isomerase-like, N-terminal domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGGCCCAGGTACAACATGCCGATACAGAACACCCACTCCAACACCCCG
Internal bar code:AGTCGCAGGTTATATGTAATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3046
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGTCCTTGCTCTCCAACC
Suggested primer 2:GCGCTGGTTCACTACTGACT