Insertion junction: CLIP2.037343_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.037343
Chromosome:chromosome 1
Location:867107
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g004900 Similar to Putatative Protease/Amidase; (1 of 1) PTHR11019//PTHR11019:SF1//PTHR11019:SF97 - THIJ/PFPI // SUBFAMILY NOT NAMED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGATGTGGAGTGCGAAGTAAGTTGGGCAAGCCGGATTTCACGACTGGG
Internal bar code:GGCCCACTAGGGGTCGGGACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4985
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:98
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:98

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCGCAACCTGGGTTAGTG
Suggested primer 2:GAGTTTGTCCGGAGAGCCAA