Insertion junction: CLIP2.037347_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.037347
Chromosome:chromosome 3
Location:5760268
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g187400 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGAACCCCCCCTCGGGCGATCGACGAACGACCTGACCCCGAGTGGCAC
Internal bar code:GGTGGAAGAAAGTTGCTCGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:921
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CACGCACACTCATGCAAACA
Suggested primer 2:CAGGAAAGTGTGTTGCTGGC