Insertion junction: CLIP2.037347_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.037347
Chromosome:chromosome 10
Location:638686
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g421900 SRR27 Scavenger receptor cysteine rich (SRCR) protein; (1 of 5) 1.4.3.13 - Protein-lysine 6-oxidase / Lysyl oxidase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCGCAGAAAGCCCATGGTGCAGAAGGCGCCGCCATGGCCTGATGCTGT
Internal bar code:AATGTGTCTTAATGGCCTACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:808
LEAP-Seq percent confirming:17.8571
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TCACCACAATGACAGGCCTC
Suggested primer 2:CACCACAATAATGCGCCTCG