Insertion junction: CLIP2.037349_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.037349
Chromosome:chromosome 1
Location:1760052
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g009700 PPP1 (1 of 3) PTHR12320//PTHR12320:SF15 - PROTEIN PHOSPHATASE 2C // SUBFAMILY NOT NAMED; Phosphoprotein phosphatase 2C-related intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAGTCAAGTGCAATGCGCACATATCCCGTGTATATATCGCTGTGAAGC
Internal bar code:TTACATTATTATCCTGGTCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1975
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CGAAGATGTTGAGCGCGAAG
Suggested primer 2:GTCCATAATGGCCCCAACCA