Insertion junction: CLIP2.037352_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.037352
Chromosome:chromosome 3
Location:6608073
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g194800 (1 of 1) K14399 - polyribonucleotide 5'-hydroxyl-kinase (CLP1, HERB) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATCTCAGGGTTGGTGTGGCAGTGCCTGTGGCGCCCCTACGTACCAGCA
Internal bar code:CTGTCACTGGGTGCTGTCAGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2355
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTCTTCACACATGTGGGA
Suggested primer 2:GGTGCGTGTTGAGGTACTGA