Insertion junction: CLIP2.037357_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.037357
Chromosome:chromosome 6
Location:6105426
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g291150 HEL29 (1 of 5) K12823 - ATP-dependent RNA helicase DDX5/DBP2 (DDX5, DBP2); DEAD/DEAH box helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATAAAACTTGCACATGCTGGTCGGCTTCCGCCCGCGTGCAGGTCCTGG
Internal bar code:GACCCCCTCACCCGGTCCACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:946
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CATCTACGCAAGCACAGTGC
Suggested primer 2:CATGGTCGGATGGGTTCCAA