Insertion junction: CLIP2.037363_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.037363
Chromosome:chromosome 9
Location:880260
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g403450 (1 of 6) PF12796//PF13920 - Ankyrin repeats (3 copies) (Ank_2) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCAAAGCAAGTGCATGCCGCGCACGCTTCCACGCACAAATAAGAGTACA
Internal bar code:GCCTGGGTGTCTTTAATCTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2674
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CCCACCTTTCTACCTGCAGG
Suggested primer 2:CCTCCTATGTGCTGCTCCTG