Insertion junction: CLIP2.037370_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.037370
Chromosome:chromosome 11
Location:2045718
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467759 PIC1,PIC1-2 (1 of 2) PTHR34548:SF2 - PROTEIN TIC 21, CHLOROPLASTIC; Similar to AtTic21/PIC1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAAGAGGCGGCAGAGGGGCTGCACGTGGGGTCTGAGCGTCTTTCGAAG
Internal bar code:AGTCGATGTGGTTATGCTGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1517
LEAP-Seq percent confirming:15.2542
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:50
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGGCCTTGAGGTTCCAAG
Suggested primer 2:TTCCTGTCCACCTTCTTCGC