Insertion junction: CLIP2.037372_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.037372
Chromosome:chromosome 3
Location:1814133
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g154200 (1 of 1) PTHR15970//PTHR15970:SF2 - FAMILY NOT NAMED // ELL-ASSOCIATED FACTOR EAF intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCAGGCACGCTCGTGACGCGGCGCCCTACCGAGCGCCAGCGGAGGACA
Internal bar code:CTTTTCTGGAGTACAAGTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:577
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCTGACGACTTTGACAGT
Suggested primer 2:ATTGCGCTACGATTTTCGGC