Insertion junction: CLIP2.037376_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.037376
Chromosome:chromosome 10
Location:3350578
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g443550 (1 of 1) 2.7.11.11//2.7.11.12 - cAMP-dependent protein kinase / Protein kinase A // cGMP-dependent protein kinase / PKG II intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGATGGCAATGCCGAGACAGGCCGTCTCCTGGCACACGCTGTGGGGCTG
Internal bar code:GGCAGTCGTGATTTCTCTAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:72
LEAP-Seq percent confirming:18.1818
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCATTTCCTACCCACAGC
Suggested primer 2:AACGCGGGGAGCTTTCTAAA