Insertion junction: CLIP2.037385_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.037385
Chromosome:chromosome 16
Location:2153981
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g801897 (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACCGAAGTCGCCGAGTCGGCAGACGAACCGCCGCCGCCCGACCGTCTT
Internal bar code:ACTCGTCCAAGCTGTAGTCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3162
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGCTGGATGGTGGCGG
Suggested primer 2:GTCAAGTGGTTTAGCCCGGA