Insertion junction: CLIP2.037392_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.037392
Chromosome:chromosome 12
Location:7054130
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g560350 CNK2 (1 of 1) PTHR24361//PTHR24361:SF410 - MITOGEN-ACTIVATED KINASE KINASE KINASE // SUBFAMILY NOT NAMED; NIMA-Related Kinase 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCGCCGCCGGCGCCGTCCGCCGCGGCGGGCGGCAAGCTGCCGCAGCTG
Internal bar code:GTTCTTTACGCCGACGCGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1505
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:AATGAGAGGACCCCGACAGA
Suggested primer 2:CATCCCCAACACCTTCTCCC