Insertion junction: CLIP2.037395_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.037395
Chromosome:chromosome 11
Location:939777
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467658 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCGCCGTATGCGCGGCGGGTTTGGTACGACTGGAGGCGGTGGCGGTGG
Internal bar code:AAGTCGTAAGCACGCTTACAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2690
LEAP-Seq percent confirming:91.2281
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:ACAAGGGAAGGAAGACTGCG
Suggested primer 2:TAAGCACGTGCCACTTCCAT