Insertion junction: CLIP2.037401_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.037401
Chromosome:chromosome 2
Location:4407866
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00041440

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGAAAGAAAGGGCGTCACGGTTGGCGGTTCGTTGCACATCCCCTCACA
Internal bar code:TAACCGTAGTGGTTGGATTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1136
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGGACTCGTTGGTCAGTT
Suggested primer 2:GGCCACCCTGCAGTTAGAAT