Insertion junction: CLIP2.037401_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.037401
Chromosome:chromosome 2
Location:4407870
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00041440

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCACAGCGTTTCGTGTGCTTGGCCAATATTGCTTAACGATTCCTCAAG
Internal bar code:TAACCGTAGTGGTTGGATTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:674
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCACCCTGCAGTTAGAAT
Suggested primer 2:GTCGGACTCGTTGGTCAGTT