Insertion junction: CLIP2.037402_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.037402
Chromosome:chromosome 17
Location:5572833
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g739650 MAE1,MFT1 MATE efflux family protein; (1 of 5) PTHR11206//PTHR11206:SF94 - MULTIDRUG RESISTANCE PROTEIN // DNA-DAMAGE-INDUCIBLE PROTEIN F intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAAATAAACCTGCAGATGCTCGCGGCATTGGCGACGGACCCGATTGCG
Internal bar code:TCTTGTCTATGACGTTTGTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:294
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTGGTGGCTGTGTTGAAG
Suggested primer 2:AAGGGGGTTCGTGCATTAGG