Insertion junction: CLIP2.037406_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.037406
Chromosome:plastome
Location:160061
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802323 2717034,atpB,ChreCp058 (1 of 1) K02112 - F-type H+-transporting ATPase subunit beta (ATPF1B, atpD); ATPase beta chain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGTGGTTCGTTCATTTGACCGTATACAAGAGCTACTTTTGAATCAGA
Internal bar code:AAAATGCTTTTGCAAAATTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:168
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ATTCACCGTACAGCTCCTGC
Suggested primer 2:TCACCAAGAATCCACGGTTGT