Insertion junction: CLIP2.037418_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.037418
Chromosome:chromosome 2
Location:928478
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g079200 (1 of 1) PTHR11064//PTHR11064:SF45 - CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCAAAGCCCAACGTCGTCATGGCCCACAGCAGGTCGTCGCCGTTAATT
Internal bar code:GTTCTGGACGTTATTTTGTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5823
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCCTAGCAAACTCACCTT
Suggested primer 2:AGACAAAGGACCTGACAGCG