Insertion junction: CLIP2.037420_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.037420
Chromosome:chromosome 6
Location:7062922
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g297650 UBC36 (1 of 1) K10582 - ubiquitin-conjugating enzyme E2 Q (UBE2Q); E2 ubiquitin conjugating enzyme CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGATCGCTGGGCGAGGGAATCTACTTCGCCGCAAACGCCAGCTACTCCC
Internal bar code:TATGAAGCCTATTGGCCCGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:904
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCCTGCATGTTGTCAAAC
Suggested primer 2:TCCGGCTTGGTCTCTTCAAC