Insertion junction: CLIP2.037422_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.037422
Chromosome:chromosome 8
Location:3555296
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g379350 TPT10,TPT phosphate/phosphoenolpyruvate translocator; (1 of 2) PTHR11132:SF70 - PHOSPHOENOLPYRUVATE/PHOSPHATE TRANSLOCATOR 1, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGTGCTACGCGGAGGTATCGTACTGGGTTAGGTGAGAACAACTCCTCC
Internal bar code:ATCACGCCATGGCATCTAAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:51
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGCCCTACCCGTTGTTT
Suggested primer 2:CTGAGCTTCCAGCCCTCAAA