Insertion junction: CLIP2.037433_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.037433
Chromosome:chromosome 12
Location:1280041
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g489600 (1 of 3) IPR003029//IPR012340//IPR022967 - S1 domain // Nucleic acid-binding, OB-fold // RNA-binding domain, S1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGATCTGGGTCAAGGTGCGTGCAAGGGCTGGGGTGTGCAGGGAGTGGGG
Internal bar code:TGGTTTTATTCGAGATGACTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:86
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTAGCCCCAGTCGATCTT
Suggested primer 2:ACTGGTGTCATTCGCGAGTT