Insertion junction: CLIP2.037434_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.037434
Chromosome:chromosome 12
Location:2255089
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508644 HDG1 (1 of 1) PTHR11850//PTHR11850:SF132 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // BEL1-LIKE HOMEODOMAIN PROTEIN 11; BELL-related homeodomain protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGGGCTGCAGCTGCCGTTGCCGCTGCTACTGCTAACGCGCGCCAGGCG
Internal bar code:GTTTCTGGTGCGTCCAGGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2440
LEAP-Seq percent confirming:65.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTCAGTGTTGTTGCTGGC
Suggested primer 2:CCCATGTCCACGTGTACCAA