Insertion junction: CLIP2.037437_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.037437
Chromosome:chromosome 17
Location:5258044
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802106 (1 of 32) IPR029062 - Class I glutamine amidotransferase-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCCGTTCCGGCGCCGCTAGCTTGCCCCGCTTCTGGGACCTTGTGGAC
Internal bar code:GACCGTACGTCGACGCCGAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1567
LEAP-Seq percent confirming:63.6364
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCGTGCTCAGTTTTCAAA
Suggested primer 2:TCGTTTAAGCACGCCTTCCT