Insertion junction: CLIP2.037441_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.037441
Chromosome:chromosome 12
Location:2925205
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g502500 ELG34 Exostosin-like glycosyltransferase 34; (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGTGACGGCGTTGCCGAGCTGCGGCTGACCGACCCCAGGCCGTCAAGA
Internal bar code:TCGGTGCAGGGGTTATAGCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:488
LEAP-Seq percent confirming:23.8095
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAAGAGGAAGGTGCCGTT
Suggested primer 2:AAGTGGCCCTGGTTTGACAA