Insertion junction: CLIP2.037451_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.037451
Chromosome:chromosome 7
Location:5388002
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g350450 (1 of 2) PTHR22763:SF71 - PROTEIN Y105C5B.11, ISOFORM B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAGGCCAAGCGCTACAAGCTGCACGTGGAGGCGCTGCTCGCGGAGATG
Internal bar code:GAAACCCGCACGTCCTTTACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3265
LEAP-Seq percent confirming:45.3125
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:CGACTGCGGTTGTTGAGTTG
Suggested primer 2:GCACGTGTTTCCACCAGAAC