Insertion junction: CLIP2.037456_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.037456
Chromosome:chromosome 17
Location:2664880
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g716900 (1 of 1) IPR002104//IPR010998//IPR011010 - Integrase, catalytic domain // Integrase, Lambda-type, N-terminal // DNA breaking-rejoining enzyme, catalytic core CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGAACGCTGCAGCCACCTCAGGGTCGGCGCCCACGGCCGGCGCGCTGT
Internal bar code:GTCCTGTACGGGACGGAGTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1517
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTTAAGCCGTGCGTGTGG
Suggested primer 2:GTCAACGGTTTGATCACGGC