Insertion junction: CLIP2.037476_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.037476
Chromosome:chromosome 16
Location:1568748
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g653650 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGTTCGGAGGGACGGGGGCGAGGCTGGGCCGCGGCAGTATCCGGTCCC
Internal bar code:TCATACTCTGAGCGTAAGGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:3308
LEAP-Seq percent confirming:75.6757
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGAGGGGAGTCCGAAGAT
Suggested primer 2:TATATTTGTGCGTGCGCGTG