Insertion junction: CLIP2.037477_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.037477
Chromosome:chromosome 11
Location:2651620
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095078 (1 of 2) IPR000104//IPR011705 - Antifreeze protein, type I // BTB/Kelch-associated CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGCAGGCGGCACACGAGCACGTCAGCTTCCACCTGGATGCGCCCGGC
Internal bar code:AGTTGAGGTCACCCCTCATCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2088
LEAP-Seq percent confirming:70.5882
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGACCTGTTACGGCCTAT
Suggested primer 2:GCTGGCTTTCGCATTCCAAA