Insertion junction: CLIP2.037480_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.037480
Chromosome:chromosome 17
Location:2776545
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g718000 PHC7,PHC6 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Pherophorin-chlamydomonas homolog 7 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTGTGTGTGTGGTGGTGGTGGTGGGGGGGGGGGTTGTAGATACCCGCC
Internal bar code:ATCCAGGGGGTTATAAGGCGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2528
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:GGCATCTCCTGTGTGTGTGA
Suggested primer 2:TTTGGCGTGGCGTTGTAAAG