Insertion junction: CLIP2.037481_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.037481
Chromosome:chromosome 3
Location:277632
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144404 (1 of 14) PF03133 - Tubulin-tyrosine ligase family (TTL) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACACACAACACACAATACGGTACACAACCCACGCACAGTCTGCCCTGGC
Internal bar code:GGCTCGTTATTATGTTTAATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:924
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCAATGGGATGTGTGGAG
Suggested primer 2:CCGAGGCTCGTAAAACACCT