Insertion junction: CLIP2.037488_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.037488
Chromosome:chromosome 15
Location:865388
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g640250 (1 of 1) K07562 - nonsense-mediated mRNA decay protein 3 (NMD3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAACAAACTCCTGATGGCCCAGCGGTCCCACTGCATTGCTCCATTCCTG
Internal bar code:GTGGCACTGGTGCTCAAGGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:163
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGAGAGGAGGGCATCAGA
Suggested primer 2:TATGGCATGCATGTGTGGGT