Insertion junction: CLIP2.037491_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.037491
Chromosome:chromosome 4
Location:541006
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217935 (1 of 1) K11886 - proteasome component ECM29 (ECM29) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGAAGTGAAGGCGTAGCGGCGGTGGCTGGACACTGATGTGGCTAGGAAC
Internal bar code:TGAGCTGATGAAGCGCCTGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1757
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGGAGAAGGTGCGAAAGG
Suggested primer 2:CAACACACACGTCCAAGCAG