Insertion junction: CLIP2.037491_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.037491
Chromosome:chromosome 12
Location:8911865
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g545800 ROC55,ROC11 Rhythm Of Chloroplast 55; (1 of 24) IPR006553 - Leucine-rich repeat, cysteine-containing subtype CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCGGGCTGGGTTCGGGCAGCCCCTCCGGCAGCACCAGATTCAGCGCGG
Internal bar code:GAGATATATTCAATAGATATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2478
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAGCCCCTGAACAACTGC
Suggested primer 2:GTTCACAAAGGCAGGTGCTG