Insertion junction: CLIP2.037494_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.037494
Chromosome:chromosome 8
Location:458332
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358900 (1 of 3) 2.4.2.8 - Hypoxanthine phosphoribosyltransferase / Transphosphoribosidase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCACTCGCGGCCGCACCCGCACCCGCGCCCCCTGCCCCTTCACCCGGA
Internal bar code:CTGTCTAGGCCGGTGCGCGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1487
LEAP-Seq percent confirming:79.4118
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CACAAAACCCTTTCCCGCTG
Suggested primer 2:TATCTAAGCTTGCGCGAGGG