Insertion junction: CLIP2.037515_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.037515
Chromosome:chromosome 17
Location:2468898
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g715300 PKD2 (1 of 2) PTHR10877//PTHR10877:SF135 - POLYCYSTIN-RELATED // SUBFAMILY NOT NAMED; Polycystin-2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTACGAGCTGCTGGTGTACATGGTGCTGCTCAACTTCCTGCTCGCCATC
Internal bar code:CACAGGGTCGGGCCTCTGCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3961
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:GGGAGTACGAGGTTGTGCTC
Suggested primer 2:CTCCAGCAAGTACGCTTCCA