Insertion junction: CLIP2.037516_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.037516
Chromosome:chromosome 7
Location:1771954
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325722 (1 of 1) PTHR13215:SF0 - SUB1 HOMOLOG (S. CEREVISIAE); RNA polymerase coactivator intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTCTCTCCAAGTAGCCCCTCTCACTCACCGACACGACCGCCTTGTACG
Internal bar code:GACAGGCGACATTGGGGCCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1654
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGACAACCACCACTCTGG
Suggested primer 2:AACCGTCGTTTTGCTGCATC