Insertion junction: CLIP2.037540_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.037540
Chromosome:chromosome 11
Location:3061078
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g474800 OTA1 Ornithine transaminase; (1 of 1) 2.6.1.13 - Ornithine aminotransferase / Ornithine--oxo-acid transaminase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAAGCACGGCGCAGTGACAGGGCGATCCGCAACAAATCACAGGGCCAGA
Internal bar code:AAGCTTAACTGTCGGTGCCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:985
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGCATAATCTCGTCCCGC
Suggested primer 2:CACTACTAGGTGCCGCTAGC