Insertion junction: CLIP2.037547_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.037547
Chromosome:chromosome 13
Location:3481207
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre13.g587500 AOF8 (1 of 2) 1.3.5.5 - 15-cis-phytoene desaturase / Plant-type phytoene desaturase; Flavin-containing amine oxidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAATGATGGGTGTATGCGCTTGGCGGTACCGCTGGTCTGCGAGTGACCC
Internal bar code:GATTATTCTCCTTAGACGTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:867
LEAP-Seq percent confirming:84.2105
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGGAGTAGGGAGAGTGGC
Suggested primer 2:ACTCCCCTACACATCCCCTC