Insertion junction: CLIP2.037550_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.037550
Chromosome:chromosome 6
Location:7632869
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g302000 MFP31,MFP1 Major facilitator superfamily transporter; (1 of 2) PF05977 - Transmembrane secretion effector (MFS_3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAGGCTGTACCCCAGGAAGTCCAGTGTGCCCGCCACGTGCAGCAGCGG
Internal bar code:TAGCAGGTTGATTCCAGCGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:5109
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:111
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:111

Suggested primers for confirmation by PCR

Suggested primer 1:GACTGGGGTTTGCTTGCAAG
Suggested primer 2:CCCCAATATCTCCACGTCCG