Insertion junction: CLIP2.037558_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.037558
Chromosome:chromosome 16
Location:2715840
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661900 HEL61 (1 of 3) PTHR24031//PTHR24031:SF232 - RNA HELICASE // ATP-DEPENDENT RNA HELICASE TDRD12-RELATED; DEAD/DEAH box helicase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGTGCAGCTGCCGGAGGGTCAGATGTGCATGCGCTCCGCGCCGCCAAC
Internal bar code:TTGCATGTGTATGATTCCATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1909
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGGGGCCTTCATAGCAGG
Suggested primer 2:ACGAGGATTGAGGCATTGCA