Insertion junction: CLIP2.037562_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.037562
Chromosome:chromosome 16
Location:4926391
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g686650 (1 of 1) PTHR31057//PTHR31057:SF0 - FAMILY NOT NAMED // E3 UFM1-PROTEIN LIGASE 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAGGGGGGGGGTTACATTCATGATTAATTAATTAAGAAGTGATGGAGG
Internal bar code:AAAAATGGGCCGTTTCTAGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:144
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCTCTCACACAGGCGAGA
Suggested primer 2:ACAAGAGGAAGGTCAAGCGG