Insertion junction: CLIP2.037563_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.037563
Chromosome:chromosome 1
Location:3370056
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g021850 HEL2 (1 of 2) PTHR24031:SF249 - ATP-DEPENDENT DNA HELICASE RECG; DEAD/DEAH box helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCAGGACCGCGTATGTCGTGTTTCAGGGAAGCAAAGGCTAGCGCCCTG
Internal bar code:AGAAAAGTTTGAGTAAACCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:87
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGAGCGCCAATGTCGAAG
Suggested primer 2:GGACAGGGATGAAAGGGCAA