Insertion junction: CLIP2.037564_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.037564
Chromosome:chromosome 2
Location:5388565
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g113652 (1 of 2) PTHR24320:SF1 - 3-KETODIHYDROSPHINGOSINE REDUCTASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTCCGCAGCCTTTGGCCGTGGCGGTTTGTTTCATTTGATTTCGCATTA
Internal bar code:GATATGGCTCGTCGCTAGGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3218
LEAP-Seq percent confirming:97.0588
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GACCTCACATTCAGCCCACA
Suggested primer 2:CGGGTAACAGCACCAAGTCT