Insertion junction: CLIP2.037571_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.037571
Chromosome:chromosome 14
Location:1944737
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g801623 (1 of 1) IPR006119 - Resolvase, N-terminal catalytic domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATCCTCAAAAGCCTTCAGTTGCTCCTTGCGCATCTCACACCCTACCCGG
Internal bar code:TGATTCAACAGGTGTCACGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2866
LEAP-Seq percent confirming:57.3913
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:49
LEAP-Seq n unique pos:115

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTCGATCTCGCCACAACA
Suggested primer 2:CACAAACAAAGCGTGGGAGG